Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC31.88■■■□□ 2.69
Chd1P40201 Gm9988-201ENSMUST00000069786 435 ntBASIC31.88■■■□□ 2.69
Chd1P40201 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Chd1P40201 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Chd1P40201 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Chd1P40201 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Chd1P40201 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Chd1P40201 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
Chd1P40201 Reep4-203ENSMUST00000226563 1444 ntBASIC31.86■■■□□ 2.69
Chd1P40201 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Chd1P40201 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
Chd1P40201 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC31.86■■■□□ 2.69
Chd1P40201 Gm20760-201ENSMUST00000179197 648 ntBASIC31.86■■■□□ 2.69
Chd1P40201 Gm27045-201ENSMUST00000182145 1402 ntBASIC31.86■■■□□ 2.69
Chd1P40201 Gm43859-201ENSMUST00000200075 1412 ntBASIC31.85■■■□□ 2.69
Chd1P40201 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Chd1P40201 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Chd1P40201 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Chd1P40201 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Chd1P40201 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Chd1P40201 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC31.84■■■□□ 2.69
Chd1P40201 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Chd1P40201 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Chd1P40201 Gm13148-201ENSMUST00000118892 745 ntBASIC31.83■■■□□ 2.69
Chd1P40201 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Chd1P40201 Gm12527-201ENSMUST00000117967 564 ntBASIC31.82■■■□□ 2.68
Chd1P40201 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Chd1P40201 Mir5133-201ENSMUST00000174955 77 ntBASIC31.81■■■□□ 2.68
Chd1P40201 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Chd1P40201 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Chd1P40201 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Chd1P40201 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Chd1P40201 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC31.8■■■□□ 2.68
Chd1P40201 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Chd1P40201 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC31.8■■■□□ 2.68
Chd1P40201 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Chd1P40201 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Chd1P40201 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC31.79■■■□□ 2.68
Chd1P40201 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Chd1P40201 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
Chd1P40201 Gm42555-201ENSMUST00000199304 1039 ntBASIC31.78■■■□□ 2.68
Chd1P40201 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC31.78■■■□□ 2.68
Chd1P40201 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Chd1P40201 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
Chd1P40201 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Chd1P40201 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Chd1P40201 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Chd1P40201 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Chd1P40201 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Chd1P40201 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC31.77■■■□□ 2.68
Chd1P40201 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Chd1P40201 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Chd1P40201 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
Chd1P40201 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Chd1P40201 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC31.76■■■□□ 2.67
Chd1P40201 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Chd1P40201 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Chd1P40201 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Chd1P40201 Gm22240-201ENSMUST00000175225 82 ntBASIC31.75■■■□□ 2.67
Chd1P40201 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Chd1P40201 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Chd1P40201 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Chd1P40201 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC31.75■■■□□ 2.67
Chd1P40201 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Chd1P40201 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Chd1P40201 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Chd1P40201 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC31.73■■■□□ 2.67
Chd1P40201 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Chd1P40201 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Chd1P40201 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Chd1P40201 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC31.72■■■□□ 2.67
Chd1P40201 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Chd1P40201 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC31.72■■■□□ 2.67
Chd1P40201 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Chd1P40201 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Chd1P40201 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Chd1P40201 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Chd1P40201 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC31.71■■■□□ 2.67
Chd1P40201 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
Chd1P40201 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Chd1P40201 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Chd1P40201 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Chd1P40201 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC31.7■■■□□ 2.67
Chd1P40201 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Chd1P40201 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Chd1P40201 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
Chd1P40201 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
Chd1P40201 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Chd1P40201 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Chd1P40201 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
Chd1P40201 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Chd1P40201 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Chd1P40201 Gm27801-201ENSMUST00000184174 223 ntBASIC31.68■■■□□ 2.66
Chd1P40201 Gm7514-201ENSMUST00000209475 934 ntBASIC31.68■■■□□ 2.66
Chd1P40201 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Chd1P40201 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Chd1P40201 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Chd1P40201 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Chd1P40201 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC31.67■■■□□ 2.66
Chd1P40201 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms