Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.31■□□□□ 0.84
Fen1P39749 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.31■□□□□ 0.84
Fen1P39749 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.31■□□□□ 0.84
Fen1P39749 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fen1P39749 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fen1P39749 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fen1P39749 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Fen1P39749 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fen1P39749 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fen1P39749 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fen1P39749 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fen1P39749 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Fen1P39749 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fen1P39749 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.3■□□□□ 0.84
Fen1P39749 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fen1P39749 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fen1P39749 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Fen1P39749 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Fen1P39749 Gm14523-201ENSMUST00000117260 558 ntBASIC20.29■□□□□ 0.84
Fen1P39749 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.29■□□□□ 0.84
Fen1P39749 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.29■□□□□ 0.84
Fen1P39749 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Fen1P39749 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fen1P39749 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Fen1P39749 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Fen1P39749 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fen1P39749 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fen1P39749 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fen1P39749 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Fen1P39749 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fen1P39749 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fen1P39749 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fen1P39749 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Fen1P39749 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.27■□□□□ 0.84
Fen1P39749 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fen1P39749 Golph3-202ENSMUST00000226517 2359 ntBASIC20.27■□□□□ 0.83
Fen1P39749 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fen1P39749 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Fen1P39749 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fen1P39749 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fen1P39749 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.26■□□□□ 0.83
Fen1P39749 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fen1P39749 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fen1P39749 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fen1P39749 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fen1P39749 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fen1P39749 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fen1P39749 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fen1P39749 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Fen1P39749 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Fen1P39749 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.25■□□□□ 0.83
Fen1P39749 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fen1P39749 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.25■□□□□ 0.83
Fen1P39749 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fen1P39749 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fen1P39749 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fen1P39749 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fen1P39749 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fen1P39749 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Fen1P39749 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fen1P39749 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fen1P39749 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fen1P39749 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Fen1P39749 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fen1P39749 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fen1P39749 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
Fen1P39749 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fen1P39749 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fen1P39749 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.23■□□□□ 0.83
Fen1P39749 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.23■□□□□ 0.83
Fen1P39749 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.23■□□□□ 0.83
Fen1P39749 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Fen1P39749 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fen1P39749 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fen1P39749 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fen1P39749 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fen1P39749 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fen1P39749 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Fen1P39749 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fen1P39749 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fen1P39749 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms