Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a13P31649 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slc6a13P31649 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a13P31649 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a13P31649 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a13P31649 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Slc6a13P31649 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a13P31649 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a13P31649 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Slc6a13P31649 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a13P31649 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a13P31649 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a13P31649 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a13P31649 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a13P31649 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a13P31649 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a13P31649 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc6a13P31649 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a13P31649 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.69■□□□□ 0.9
Slc6a13P31649 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a13P31649 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.68■□□□□ 0.9
Slc6a13P31649 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.68■□□□□ 0.9
Slc6a13P31649 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a13P31649 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Slc6a13P31649 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a13P31649 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a13P31649 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Slc6a13P31649 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a13P31649 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.67■□□□□ 0.9
Slc6a13P31649 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
Slc6a13P31649 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Slc6a13P31649 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Slc6a13P31649 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a13P31649 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a13P31649 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slc6a13P31649 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a13P31649 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a13P31649 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a13P31649 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Slc6a13P31649 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Slc6a13P31649 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Slc6a13P31649 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.65■□□□□ 0.9
Slc6a13P31649 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Slc6a13P31649 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a13P31649 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc6a13P31649 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a13P31649 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.64■□□□□ 0.89
Slc6a13P31649 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a13P31649 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a13P31649 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.64■□□□□ 0.89
Slc6a13P31649 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a13P31649 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a13P31649 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a13P31649 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
Slc6a13P31649 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a13P31649 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slc6a13P31649 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.63■□□□□ 0.89
Slc6a13P31649 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a13P31649 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a13P31649 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a13P31649 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Slc6a13P31649 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a13P31649 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a13P31649 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a13P31649 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a13P31649 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a13P31649 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a13P31649 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Slc6a13P31649 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.62■□□□□ 0.89
Slc6a13P31649 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.62■□□□□ 0.89
Slc6a13P31649 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a13P31649 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a13P31649 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slc6a13P31649 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slc6a13P31649 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc6a13P31649 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a13P31649 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a13P31649 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc6a13P31649 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a13P31649 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a13P31649 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.6■□□□□ 0.89
Slc6a13P31649 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a13P31649 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.6■□□□□ 0.89
Slc6a13P31649 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 147.7 ms