Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.36■□□□□ 0.85
APEX1P27695 MIR4508-201ENST00000584178 70 ntBASIC20.36■□□□□ 0.85
APEX1P27695 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.36■□□□□ 0.85
APEX1P27695 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
APEX1P27695 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
APEX1P27695 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.35■□□□□ 0.85
APEX1P27695 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.35■□□□□ 0.85
APEX1P27695 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.35■□□□□ 0.85
APEX1P27695 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 AC090877.2-201ENST00000558441 1738 ntBASIC20.35■□□□□ 0.85
APEX1P27695 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
APEX1P27695 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
APEX1P27695 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
APEX1P27695 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.34■□□□□ 0.85
APEX1P27695 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APEX1P27695 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
APEX1P27695 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
APEX1P27695 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
APEX1P27695 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
APEX1P27695 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
APEX1P27695 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
APEX1P27695 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
APEX1P27695 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APEX1P27695 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APEX1P27695 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APEX1P27695 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APEX1P27695 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APEX1P27695 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.32■□□□□ 0.84
APEX1P27695 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.32■□□□□ 0.84
APEX1P27695 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APEX1P27695 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.32■□□□□ 0.84
APEX1P27695 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.32■□□□□ 0.84
APEX1P27695 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
APEX1P27695 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.32■□□□□ 0.84
APEX1P27695 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APEX1P27695 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
APEX1P27695 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.31■□□□□ 0.84
APEX1P27695 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.31■□□□□ 0.84
APEX1P27695 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.31■□□□□ 0.84
APEX1P27695 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.31■□□□□ 0.84
APEX1P27695 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APEX1P27695 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
APEX1P27695 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.3■□□□□ 0.84
APEX1P27695 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.3■□□□□ 0.84
APEX1P27695 AC120024.1-201ENST00000562672 995 ntBASIC20.3■□□□□ 0.84
APEX1P27695 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.3■□□□□ 0.84
APEX1P27695 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
APEX1P27695 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.3■□□□□ 0.84
APEX1P27695 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APEX1P27695 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APEX1P27695 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.3■□□□□ 0.84
APEX1P27695 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APEX1P27695 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
APEX1P27695 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.29■□□□□ 0.84
APEX1P27695 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.29■□□□□ 0.84
APEX1P27695 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
APEX1P27695 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
APEX1P27695 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APEX1P27695 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
APEX1P27695 AC103724.3-201ENST00000564481 992 ntBASIC20.29■□□□□ 0.84
APEX1P27695 THA1P-201ENST00000590384 1145 ntBASIC20.29■□□□□ 0.84
APEX1P27695 AC011551.1-201ENST00000614101 683 ntBASIC20.29■□□□□ 0.84
APEX1P27695 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APEX1P27695 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
APEX1P27695 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APEX1P27695 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APEX1P27695 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
APEX1P27695 KRT18P24-201ENST00000344739 1156 ntBASIC20.28■□□□□ 0.84
APEX1P27695 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APEX1P27695 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APEX1P27695 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APEX1P27695 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APEX1P27695 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APEX1P27695 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APEX1P27695 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APEX1P27695 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APEX1P27695 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.27■□□□□ 0.84
APEX1P27695 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APEX1P27695 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms