Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxb2P0C1T1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxb2P0C1T1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 Gm43137-201ENSMUST00000198052 594 ntBASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxb2P0C1T1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxb2P0C1T1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxb2P0C1T1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxb2P0C1T1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxb2P0C1T1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.64■□□□□ 0.42
Hoxb2P0C1T1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hoxb2P0C1T1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxb2P0C1T1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxb2P0C1T1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.64■□□□□ 0.41
Hoxb2P0C1T1 Serp2-204ENSMUST00000228055 705 ntBASIC17.64■□□□□ 0.41
Hoxb2P0C1T1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Gm6139-201ENSMUST00000079261 882 ntBASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxb2P0C1T1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxb2P0C1T1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hoxb2P0C1T1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxb2P0C1T1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxb2P0C1T1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.62■□□□□ 0.41
Hoxb2P0C1T1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.62■□□□□ 0.41
Hoxb2P0C1T1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.62■□□□□ 0.41
Hoxb2P0C1T1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxb2P0C1T1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxb2P0C1T1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxb2P0C1T1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxb2P0C1T1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms