Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC17.56■□□□□ 0.4
Dkk1O54908 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC17.56■□□□□ 0.4
Dkk1O54908 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Dkk1O54908 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.56■□□□□ 0.4
Dkk1O54908 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Dkk1O54908 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dkk1O54908 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Dkk1O54908 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.55■□□□□ 0.4
Dkk1O54908 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Dkk1O54908 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC17.55■□□□□ 0.4
Dkk1O54908 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.55■□□□□ 0.4
Dkk1O54908 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Dkk1O54908 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dkk1O54908 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dkk1O54908 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dkk1O54908 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Dkk1O54908 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dkk1O54908 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dkk1O54908 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Dkk1O54908 Gm12849-201ENSMUST00000120013 739 ntBASIC17.54■□□□□ 0.4
Dkk1O54908 Gm14363-201ENSMUST00000122304 409 ntBASIC17.54■□□□□ 0.4
Dkk1O54908 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.54■□□□□ 0.4
Dkk1O54908 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.54■□□□□ 0.4
Dkk1O54908 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.54■□□□□ 0.4
Dkk1O54908 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.54■□□□□ 0.4
Dkk1O54908 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dkk1O54908 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dkk1O54908 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
Dkk1O54908 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dkk1O54908 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dkk1O54908 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dkk1O54908 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dkk1O54908 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.53■□□□□ 0.4
Dkk1O54908 Gm15626-201ENSMUST00000117478 868 ntBASIC17.53■□□□□ 0.4
Dkk1O54908 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.53■□□□□ 0.4
Dkk1O54908 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Dkk1O54908 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dkk1O54908 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dkk1O54908 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Dkk1O54908 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Dkk1O54908 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Dkk1O54908 Gm12922-201ENSMUST00000120626 809 ntBASIC17.51■□□□□ 0.39
Dkk1O54908 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dkk1O54908 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dkk1O54908 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Dkk1O54908 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.51■□□□□ 0.39
Dkk1O54908 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC17.51■□□□□ 0.39
Dkk1O54908 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dkk1O54908 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Dkk1O54908 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dkk1O54908 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Dkk1O54908 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dkk1O54908 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Dkk1O54908 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Dkk1O54908 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.5■□□□□ 0.39
Dkk1O54908 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Dkk1O54908 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.5■□□□□ 0.39
Dkk1O54908 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Dkk1O54908 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Dkk1O54908 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Dkk1O54908 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Dkk1O54908 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Dkk1O54908 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Dkk1O54908 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.49■□□□□ 0.39
Dkk1O54908 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.49■□□□□ 0.39
Dkk1O54908 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dkk1O54908 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dkk1O54908 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dkk1O54908 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dkk1O54908 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Dkk1O54908 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Dkk1O54908 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.48■□□□□ 0.39
Dkk1O54908 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.48■□□□□ 0.39
Dkk1O54908 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dkk1O54908 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms