Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm40881-201ENSMUST00000223397 166 ntBASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv17A0A140T8P8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv17A0A140T8P8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv17A0A140T8P8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv17A0A140T8P8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv17A0A140T8P8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv17A0A140T8P8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Gm7417-201ENSMUST00000192950 473 ntBASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv17A0A140T8P8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv17A0A140T8P8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv17A0A140T8P8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Gm9959-201ENSMUST00000068277 390 ntBASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv17A0A140T8P8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Trbv17A0A140T8P8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Rps24-207ENSMUST00000224568 714 ntBASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv17A0A140T8P8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Trbv17A0A140T8P8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv17A0A140T8P8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv17A0A140T8P8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv17A0A140T8P8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms