Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Scn2aA0A0J9YTW6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scn2aA0A0J9YTW6 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.7■□□□□ 0.58
Scn2aA0A0J9YTW6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2aA0A0J9YTW6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2aA0A0J9YTW6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2aA0A0J9YTW6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2aA0A0J9YTW6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2aA0A0J9YTW6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2aA0A0J9YTW6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2aA0A0J9YTW6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2aA0A0J9YTW6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn2aA0A0J9YTW6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2aA0A0J9YTW6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2aA0A0J9YTW6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm45417-201ENSMUST00000209533 758 ntBASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2aA0A0J9YTW6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2aA0A0J9YTW6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.64■□□□□ 0.58
Scn2aA0A0J9YTW6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.64■□□□□ 0.58
Scn2aA0A0J9YTW6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn2aA0A0J9YTW6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2aA0A0J9YTW6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scn2aA0A0J9YTW6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Scn2aA0A0J9YTW6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2aA0A0J9YTW6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2aA0A0J9YTW6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2aA0A0J9YTW6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm12821-201ENSMUST00000120022 600 ntBASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2aA0A0J9YTW6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Gm43137-201ENSMUST00000198052 594 ntBASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2aA0A0J9YTW6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms