Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.08■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv12-2A0A0B4J1H1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-2A0A0B4J1H1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Scarna2-201ENSMUST00000157560 414 ntBASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Gm16437-201ENSMUST00000025669 507 ntBASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Gm9806-201ENSMUST00000051080 552 ntBASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.04■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-2A0A0B4J1H1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-2A0A0B4J1H1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-2A0A0B4J1H1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms