Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv5A0A0B4J1G9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv5A0A0B4J1G9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.31■□□□□ 0.2
Trbv5A0A0B4J1G9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv5A0A0B4J1G9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv5A0A0B4J1G9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv5A0A0B4J1G9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv5A0A0B4J1G9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv5A0A0B4J1G9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv5A0A0B4J1G9 Gm7432-201ENSMUST00000210343 879 ntBASIC16.27■□□□□ 0.2
Trbv5A0A0B4J1G9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv5A0A0B4J1G9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv5A0A0B4J1G9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv5A0A0B4J1G9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv5A0A0B4J1G9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trbv5A0A0B4J1G9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv5A0A0B4J1G9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms