Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Gm45444-201ENSMUST00000211394 898 ntBASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-49A0A0A6YWX2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-49A0A0A6YWX2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms