Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AC004448.1-201ENST00000458332 883 ntBASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SAA2-SAA4A0A096LPE2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SAA2-SAA4A0A096LPE2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.52■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.52■□□□□ 0.55
SAA2-SAA4A0A096LPE2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.52■□□□□ 0.55
SAA2-SAA4A0A096LPE2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 AC092068.2-201ENST00000590491 1708 ntBASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 AC068473.5-201ENST00000616428 2072 ntBASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 AC079834.2-201ENST00000609776 1949 ntBASIC18.51■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SAA2-SAA4A0A096LPE2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 AC137630.3-201ENST00000607245 391 ntBASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SAA2-SAA4A0A096LPE2 C9orf163-202ENST00000624034 2573 ntBASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 SNX5-217ENST00000606557 1087 ntBASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.48■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SAA2-SAA4A0A096LPE2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.46■□□□□ 0.55
SAA2-SAA4A0A096LPE2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms