Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Iqck-206ENSMUST00000208658 2891 ntBASIC16.12■□□□□ 0.17
Trav17A0A075B655 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav17A0A075B655 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav17A0A075B655 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav17A0A075B655 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Gm27502-201ENSMUST00000183495 199 ntBASIC16.1■□□□□ 0.17
Trav17A0A075B655 Golph3-202ENSMUST00000226517 2359 ntBASIC16.1■□□□□ 0.17
Trav17A0A075B655 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav17A0A075B655 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Gm14523-201ENSMUST00000117260 558 ntBASIC16.09■□□□□ 0.17
Trav17A0A075B655 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav17A0A075B655 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav17A0A075B655 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav17A0A075B655 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav17A0A075B655 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav17A0A075B655 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav17A0A075B655 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav17A0A075B655 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav17A0A075B655 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav17A0A075B655 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav17A0A075B655 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav17A0A075B655 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.07■□□□□ 0.16
Trav17A0A075B655 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav17A0A075B655 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav17A0A075B655 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Gm7332-201ENSMUST00000118351 454 ntBASIC16.06■□□□□ 0.16
Trav17A0A075B655 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.06■□□□□ 0.16
Trav17A0A075B655 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav17A0A075B655 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms