Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh20Q9Z0M3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh20Q9Z0M3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh20Q9Z0M3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh20Q9Z0M3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdh20Q9Z0M3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdh20Q9Z0M3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh20Q9Z0M3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Gm15546-201ENSMUST00000122095 826 ntBASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh20Q9Z0M3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Cdh20Q9Z0M3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh20Q9Z0M3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cdh20Q9Z0M3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh20Q9Z0M3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh20Q9Z0M3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh20Q9Z0M3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh20Q9Z0M3 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.86■□□□□ 0.61
Cdh20Q9Z0M3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh20Q9Z0M3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh20Q9Z0M3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Cdh20Q9Z0M3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.86■□□□□ 0.61
Cdh20Q9Z0M3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh20Q9Z0M3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdh20Q9Z0M3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.83■□□□□ 0.61
Cdh20Q9Z0M3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh20Q9Z0M3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh20Q9Z0M3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh20Q9Z0M3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.83■□□□□ 0.6
Cdh20Q9Z0M3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh20Q9Z0M3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdh20Q9Z0M3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh20Q9Z0M3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh20Q9Z0M3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms