Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AF213884.3-201ENST00000563833 479 ntBASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 AC099791.2-201ENST00000605725 427 ntBASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 AC241377.3-202ENST00000626088 1088 ntBASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 AC241585.3-202ENST00000628937 1088 ntBASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 AC245100.8-202ENST00000629247 1058 ntBASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CSNK1G3Q9Y6M4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 SERBP1P1-201ENST00000396021 1160 ntBASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 AC011298.3-201ENST00000615796 283 ntBASIC22.32■■□□□ 1.16
CSNK1G3Q9Y6M4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 AC091305.1-201ENST00000479476 895 ntBASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 AP001330.3-201ENST00000520123 633 ntBASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 RARRES2P6-201ENST00000567333 442 ntBASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CSNK1G3Q9Y6M4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 MIR4767-201ENST00000582827 78 ntBASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 C17orf82-201ENST00000623772 1530 ntBASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G3Q9Y6M4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 AC105265.2-201ENST00000467189 838 ntBASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G3Q9Y6M4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.28■■□□□ 1.16
CSNK1G3Q9Y6M4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.27■■□□□ 1.16
CSNK1G3Q9Y6M4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CSNK1G3Q9Y6M4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G3Q9Y6M4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G3Q9Y6M4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.26■■□□□ 1.15
CSNK1G3Q9Y6M4 AC026271.2-201ENST00000428091 497 ntBASIC22.26■■□□□ 1.15
CSNK1G3Q9Y6M4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G3Q9Y6M4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G3Q9Y6M4 RASA4CP-201ENST00000424092 1398 ntBASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.25■■□□□ 1.15
CSNK1G3Q9Y6M4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms