Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna6Q9R0W9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna6Q9R0W9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna6Q9R0W9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.76■□□□□ 0.91
Chrna6Q9R0W9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna6Q9R0W9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.75■□□□□ 0.91
Chrna6Q9R0W9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna6Q9R0W9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chrna6Q9R0W9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chrna6Q9R0W9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna6Q9R0W9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Chrna6Q9R0W9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna6Q9R0W9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna6Q9R0W9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chrna6Q9R0W9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna6Q9R0W9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chrna6Q9R0W9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna6Q9R0W9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chrna6Q9R0W9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chrna6Q9R0W9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chrna6Q9R0W9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chrna6Q9R0W9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna6Q9R0W9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna6Q9R0W9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.67■□□□□ 0.9
Chrna6Q9R0W9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.67■□□□□ 0.9
Chrna6Q9R0W9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna6Q9R0W9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna6Q9R0W9 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.66■□□□□ 0.9
Chrna6Q9R0W9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna6Q9R0W9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms