Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Llcfc1Q9D9P8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Llcfc1Q9D9P8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Llcfc1Q9D9P8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Llcfc1Q9D9P8 Gm45444-201ENSMUST00000211394 898 ntBASIC21.58■■□□□ 1.05
Llcfc1Q9D9P8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Llcfc1Q9D9P8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Llcfc1Q9D9P8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Llcfc1Q9D9P8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Llcfc1Q9D9P8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Llcfc1Q9D9P8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Llcfc1Q9D9P8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Llcfc1Q9D9P8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Llcfc1Q9D9P8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Llcfc1Q9D9P8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Llcfc1Q9D9P8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.52■■□□□ 1.04
Llcfc1Q9D9P8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Llcfc1Q9D9P8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Llcfc1Q9D9P8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Llcfc1Q9D9P8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Llcfc1Q9D9P8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Llcfc1Q9D9P8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Llcfc1Q9D9P8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Llcfc1Q9D9P8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Llcfc1Q9D9P8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Llcfc1Q9D9P8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Llcfc1Q9D9P8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.5■■□□□ 1.03
Llcfc1Q9D9P8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Llcfc1Q9D9P8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Llcfc1Q9D9P8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Llcfc1Q9D9P8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Llcfc1Q9D9P8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Llcfc1Q9D9P8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Llcfc1Q9D9P8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Llcfc1Q9D9P8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms