Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Gm6139-201ENSMUST00000079261 882 ntBASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf138Q9CQE0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf138Q9CQE0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf138Q9CQE0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf138Q9CQE0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.31■□□□□ 0.68
Rnf138Q9CQE0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.31■□□□□ 0.68
Rnf138Q9CQE0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf138Q9CQE0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf138Q9CQE0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf138Q9CQE0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf138Q9CQE0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf138Q9CQE0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.29■□□□□ 0.68
Rnf138Q9CQE0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf138Q9CQE0 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.29■□□□□ 0.68
Rnf138Q9CQE0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf138Q9CQE0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf138Q9CQE0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Serp2-204ENSMUST00000228055 705 ntBASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf138Q9CQE0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 Gm12251-201ENSMUST00000117893 792 ntBASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf138Q9CQE0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf138Q9CQE0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Mir7075-201ENSMUST00000184187 82 ntBASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rnf138Q9CQE0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf138Q9CQE0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf138Q9CQE0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Gm43173-201ENSMUST00000202246 593 ntBASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.23■□□□□ 0.67
Rnf138Q9CQE0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.22■□□□□ 0.67
Rnf138Q9CQE0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms