Protein–RNA interactions for Protein: Q9BZR6

RTN4R, Reticulon-4 receptor, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RQ9BZR6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTN4RQ9BZR6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4RQ9BZR6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RTN4RQ9BZR6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.89■□□□□ 0.93
RTN4RQ9BZR6 AC010997.5-201ENST00000609182 354 ntBASIC20.89■□□□□ 0.93
RTN4RQ9BZR6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.89■□□□□ 0.93
RTN4RQ9BZR6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
RTN4RQ9BZR6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4RQ9BZR6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 MTDHP2-201ENST00000601468 714 ntBASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4RQ9BZR6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4RQ9BZR6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4RQ9BZR6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.86■□□□□ 0.93
RTN4RQ9BZR6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN4RQ9BZR6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4RQ9BZR6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RTN4RQ9BZR6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN4RQ9BZR6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4RQ9BZR6 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 KRT16P3-201ENST00000439127 1283 ntBASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4RQ9BZR6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 AL356441.2-201ENST00000443009 864 ntBASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4RQ9BZR6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN4RQ9BZR6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTN4RQ9BZR6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN4RQ9BZR6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN4RQ9BZR6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RTN4RQ9BZR6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.83■□□□□ 0.93
RTN4RQ9BZR6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
RTN4RQ9BZR6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RTN4RQ9BZR6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.83■□□□□ 0.92
RTN4RQ9BZR6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN4RQ9BZR6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.81■□□□□ 0.92
RTN4RQ9BZR6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RTN4RQ9BZR6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms