Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.82■■□□□ 1.08
Clp1Q99LI9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clp1Q99LI9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Clp1Q99LI9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clp1Q99LI9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.81■■□□□ 1.08
Clp1Q99LI9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Clp1Q99LI9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clp1Q99LI9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.8■■□□□ 1.08
Clp1Q99LI9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clp1Q99LI9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clp1Q99LI9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clp1Q99LI9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clp1Q99LI9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clp1Q99LI9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Clp1Q99LI9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clp1Q99LI9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clp1Q99LI9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clp1Q99LI9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clp1Q99LI9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Clp1Q99LI9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Clp1Q99LI9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Clp1Q99LI9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clp1Q99LI9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clp1Q99LI9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Clp1Q99LI9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Clp1Q99LI9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Clp1Q99LI9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Clp1Q99LI9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Clp1Q99LI9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Clp1Q99LI9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Clp1Q99LI9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Clp1Q99LI9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clp1Q99LI9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clp1Q99LI9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clp1Q99LI9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clp1Q99LI9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clp1Q99LI9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clp1Q99LI9 Gm10033-202ENSMUST00000211874 928 ntBASIC21.75■■□□□ 1.07
Clp1Q99LI9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Clp1Q99LI9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.75■■□□□ 1.07
Clp1Q99LI9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.75■■□□□ 1.07
Clp1Q99LI9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.75■■□□□ 1.07
Clp1Q99LI9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clp1Q99LI9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.74■■□□□ 1.07
Clp1Q99LI9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clp1Q99LI9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clp1Q99LI9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clp1Q99LI9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.74■■□□□ 1.07
Clp1Q99LI9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clp1Q99LI9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clp1Q99LI9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clp1Q99LI9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clp1Q99LI9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clp1Q99LI9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clp1Q99LI9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.73■■□□□ 1.07
Clp1Q99LI9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clp1Q99LI9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clp1Q99LI9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clp1Q99LI9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Clp1Q99LI9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.72■■□□□ 1.07
Clp1Q99LI9 Gm18671-201ENSMUST00000214826 683 ntBASIC21.72■■□□□ 1.07
Clp1Q99LI9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.72■■□□□ 1.07
Clp1Q99LI9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clp1Q99LI9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clp1Q99LI9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.71■■□□□ 1.07
Clp1Q99LI9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clp1Q99LI9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.71■■□□□ 1.07
Clp1Q99LI9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clp1Q99LI9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Clp1Q99LI9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clp1Q99LI9 AV356131-201ENSMUST00000206201 750 ntBASIC21.7■■□□□ 1.06
Clp1Q99LI9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.7■■□□□ 1.06
Clp1Q99LI9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clp1Q99LI9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clp1Q99LI9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
Clp1Q99LI9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.7■■□□□ 1.06
Clp1Q99LI9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clp1Q99LI9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clp1Q99LI9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clp1Q99LI9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Clp1Q99LI9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms