Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd3Q99LE3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd3Q99LE3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd3Q99LE3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd3Q99LE3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd3Q99LE3 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.23■□□□□ 0.99
Lysmd3Q99LE3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd3Q99LE3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lysmd3Q99LE3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd3Q99LE3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Lysmd3Q99LE3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd3Q99LE3 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.22■□□□□ 0.99
Lysmd3Q99LE3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.22■□□□□ 0.99
Lysmd3Q99LE3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Lysmd3Q99LE3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd3Q99LE3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd3Q99LE3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.21■□□□□ 0.99
Lysmd3Q99LE3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd3Q99LE3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd3Q99LE3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lysmd3Q99LE3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd3Q99LE3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Gm12821-201ENSMUST00000120022 600 ntBASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.19■□□□□ 0.98
Lysmd3Q99LE3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lysmd3Q99LE3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lysmd3Q99LE3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lysmd3Q99LE3 Gm27454-201ENSMUST00000185090 204 ntBASIC21.18■□□□□ 0.98
Lysmd3Q99LE3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lysmd3Q99LE3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lysmd3Q99LE3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd3Q99LE3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd3Q99LE3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd3Q99LE3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd3Q99LE3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Lysmd3Q99LE3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd3Q99LE3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd3Q99LE3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd3Q99LE3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Lysmd3Q99LE3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lysmd3Q99LE3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd3Q99LE3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Lysmd3Q99LE3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.13■□□□□ 0.97
Lysmd3Q99LE3 Gm43530-201ENSMUST00000195920 274 ntBASIC21.13■□□□□ 0.97
Lysmd3Q99LE3 Gm45417-201ENSMUST00000209533 758 ntBASIC21.13■□□□□ 0.97
Lysmd3Q99LE3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Lysmd3Q99LE3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms