Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 RAP2CP1-202ENST00000605179 643 ntBASIC18.72■□□□□ 0.59
TMEM56Q96MV1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 LINC00526-201ENST00000581067 1875 ntBASIC18.71■□□□□ 0.59
TMEM56Q96MV1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM56Q96MV1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TMEM56Q96MV1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TMEM56Q96MV1 GUSBP5-202ENST00000510805 1989 ntBASIC18.7■□□□□ 0.58
TMEM56Q96MV1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 AC127496.7-201ENST00000625110 1798 ntBASIC18.69■□□□□ 0.58
TMEM56Q96MV1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 AC026202.3-201ENST00000600805 1127 ntBASIC18.69■□□□□ 0.58
TMEM56Q96MV1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM56Q96MV1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM56Q96MV1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM56Q96MV1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM56Q96MV1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM56Q96MV1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMEM56Q96MV1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM56Q96MV1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 ECEL1P1-201ENST00000373592 1742 ntBASIC18.67■□□□□ 0.58
TMEM56Q96MV1 AC090877.2-201ENST00000558441 1738 ntBASIC18.67■□□□□ 0.58
TMEM56Q96MV1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM56Q96MV1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM56Q96MV1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms