Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEH1LQ96EE3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SEH1LQ96EE3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEH1LQ96EE3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.76■□□□□ 0.75
SEH1LQ96EE3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEH1LQ96EE3 KRT8P33-201ENST00000508125 1423 ntBASIC19.76■□□□□ 0.75
SEH1LQ96EE3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEH1LQ96EE3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SEH1LQ96EE3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SEH1LQ96EE3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.75■□□□□ 0.75
SEH1LQ96EE3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEH1LQ96EE3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEH1LQ96EE3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEH1LQ96EE3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEH1LQ96EE3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEH1LQ96EE3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.73■□□□□ 0.75
SEH1LQ96EE3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SEH1LQ96EE3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.72■□□□□ 0.75
SEH1LQ96EE3 AL592295.1-201ENST00000400984 884 ntBASIC19.72■□□□□ 0.75
SEH1LQ96EE3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.72■□□□□ 0.75
SEH1LQ96EE3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SEH1LQ96EE3 AC074183.2-201ENST00000623112 922 ntBASIC19.72■□□□□ 0.75
SEH1LQ96EE3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 AC019171.1-201ENST00000601251 1056 ntBASIC19.71■□□□□ 0.75
SEH1LQ96EE3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEH1LQ96EE3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 AC103834.1-201ENST00000520383 144 ntBASIC19.7■□□□□ 0.74
SEH1LQ96EE3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEH1LQ96EE3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEH1LQ96EE3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 AC233723.2-201ENST00000623798 2106 ntBASIC19.68■□□□□ 0.74
SEH1LQ96EE3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.68■□□□□ 0.74
SEH1LQ96EE3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEH1LQ96EE3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEH1LQ96EE3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEH1LQ96EE3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEH1LQ96EE3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms