Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3d19Q91X43 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3d19Q91X43 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3d19Q91X43 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3d19Q91X43 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3d19Q91X43 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3d19Q91X43 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3d19Q91X43 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3d19Q91X43 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3d19Q91X43 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3d19Q91X43 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3d19Q91X43 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3d19Q91X43 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3d19Q91X43 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3d19Q91X43 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3d19Q91X43 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3d19Q91X43 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3d19Q91X43 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3d19Q91X43 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3d19Q91X43 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Sh3d19Q91X43 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.38■■□□□ 1.01
Sh3d19Q91X43 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3d19Q91X43 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.37■■□□□ 1.01
Sh3d19Q91X43 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.37■■□□□ 1.01
Sh3d19Q91X43 Gm45417-201ENSMUST00000209533 758 ntBASIC21.37■■□□□ 1.01
Sh3d19Q91X43 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3d19Q91X43 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Sh3d19Q91X43 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3d19Q91X43 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3d19Q91X43 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3d19Q91X43 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3d19Q91X43 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3d19Q91X43 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Sh3d19Q91X43 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sh3d19Q91X43 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3d19Q91X43 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.34■■□□□ 1.01
Sh3d19Q91X43 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.34■■□□□ 1.01
Sh3d19Q91X43 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3d19Q91X43 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3d19Q91X43 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3d19Q91X43 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3d19Q91X43 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sh3d19Q91X43 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3d19Q91X43 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3d19Q91X43 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3d19Q91X43 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.33■■□□□ 1.01
Sh3d19Q91X43 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3d19Q91X43 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.33■■□□□ 1.01
Sh3d19Q91X43 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Sh3d19Q91X43 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sh3d19Q91X43 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3d19Q91X43 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3d19Q91X43 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3d19Q91X43 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3d19Q91X43 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.32■■□□□ 1
Sh3d19Q91X43 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sh3d19Q91X43 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3d19Q91X43 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3d19Q91X43 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.31■■□□□ 1
Sh3d19Q91X43 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.31■■□□□ 1
Sh3d19Q91X43 Gm43137-201ENSMUST00000198052 594 ntBASIC21.31■■□□□ 1
Sh3d19Q91X43 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3d19Q91X43 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh3d19Q91X43 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3d19Q91X43 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3d19Q91X43 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.3■■□□□ 1
Sh3d19Q91X43 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sh3d19Q91X43 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3d19Q91X43 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3d19Q91X43 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3d19Q91X43 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.29■■□□□ 1
Sh3d19Q91X43 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms