Protein–RNA interactions for Protein: Q8R2Q3

Zfp940, Zinc finger protein 940, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp940Q8R2Q3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zfp940Q8R2Q3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zfp940Q8R2Q3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Gm15546-201ENSMUST00000122095 826 ntBASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zfp940Q8R2Q3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zfp940Q8R2Q3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Zfp940Q8R2Q3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Zfp940Q8R2Q3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.02■□□□□ 0.79
Zfp940Q8R2Q3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zfp940Q8R2Q3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zfp940Q8R2Q3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Zfp940Q8R2Q3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20■□□□□ 0.79
Zfp940Q8R2Q3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zfp940Q8R2Q3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zfp940Q8R2Q3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Zfp940Q8R2Q3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zfp940Q8R2Q3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Zfp940Q8R2Q3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zfp940Q8R2Q3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Zfp940Q8R2Q3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zfp940Q8R2Q3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zfp940Q8R2Q3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Zfp940Q8R2Q3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zfp940Q8R2Q3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zfp940Q8R2Q3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zfp940Q8R2Q3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zfp940Q8R2Q3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zfp940Q8R2Q3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.94■□□□□ 0.78
Zfp940Q8R2Q3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms