Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afjQ8R1M2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afjQ8R1M2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.91■□□□□ 0.62
H2afjQ8R1M2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.91■□□□□ 0.62
H2afjQ8R1M2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afjQ8R1M2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.89■□□□□ 0.61
H2afjQ8R1M2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afjQ8R1M2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.89■□□□□ 0.61
H2afjQ8R1M2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
H2afjQ8R1M2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afjQ8R1M2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H2afjQ8R1M2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afjQ8R1M2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afjQ8R1M2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afjQ8R1M2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H2afjQ8R1M2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
H2afjQ8R1M2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afjQ8R1M2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.86■□□□□ 0.61
H2afjQ8R1M2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H2afjQ8R1M2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afjQ8R1M2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afjQ8R1M2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afjQ8R1M2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
H2afjQ8R1M2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afjQ8R1M2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afjQ8R1M2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.83■□□□□ 0.6
H2afjQ8R1M2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
H2afjQ8R1M2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.83■□□□□ 0.6
H2afjQ8R1M2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
H2afjQ8R1M2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
H2afjQ8R1M2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
H2afjQ8R1M2 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.83■□□□□ 0.6
H2afjQ8R1M2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afjQ8R1M2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
H2afjQ8R1M2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afjQ8R1M2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afjQ8R1M2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afjQ8R1M2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms