Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SIMC1Q8NDZ2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 AC021242.3-201ENST00000607598 1377 ntBASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.41■■□□□ 1.02
SIMC1Q8NDZ2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIMC1Q8NDZ2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 AC239859.2-201ENST00000444165 318 ntBASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.39■■□□□ 1.01
SIMC1Q8NDZ2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 BX664725.1-201ENST00000438252 379 ntBASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SIMC1Q8NDZ2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.37■■□□□ 1.01
SIMC1Q8NDZ2 SNX5-217ENST00000606557 1087 ntBASIC21.37■■□□□ 1.01
SIMC1Q8NDZ2 AL035685.1-201ENST00000636663 812 ntBASIC21.37■■□□□ 1.01
SIMC1Q8NDZ2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIMC1Q8NDZ2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
SIMC1Q8NDZ2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.37■■□□□ 1.01
SIMC1Q8NDZ2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIMC1Q8NDZ2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIMC1Q8NDZ2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
SIMC1Q8NDZ2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIMC1Q8NDZ2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SIMC1Q8NDZ2 AC004448.1-201ENST00000458332 883 ntBASIC21.36■■□□□ 1.01
SIMC1Q8NDZ2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIMC1Q8NDZ2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SIMC1Q8NDZ2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SIMC1Q8NDZ2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 Z92544.1-202ENST00000571933 1220 ntBASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 MIR4787-201ENST00000607364 84 ntBASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SIMC1Q8NDZ2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.33■■□□□ 1
SIMC1Q8NDZ2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIMC1Q8NDZ2 AL161729.1-201ENST00000604104 1402 ntBASIC21.32■■□□□ 1
SIMC1Q8NDZ2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.32■■□□□ 1
SIMC1Q8NDZ2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.32■■□□□ 1
SIMC1Q8NDZ2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms