Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf4Q8K4J2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 Gm44428-201ENSMUST00000204474 874 ntBASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ebf4Q8K4J2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ebf4Q8K4J2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf4Q8K4J2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf4Q8K4J2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf4Q8K4J2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.64■□□□□ 0.57
Ebf4Q8K4J2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf4Q8K4J2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf4Q8K4J2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf4Q8K4J2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ebf4Q8K4J2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf4Q8K4J2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf4Q8K4J2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Gm8503-201ENSMUST00000118131 455 ntBASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
Ebf4Q8K4J2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf4Q8K4J2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf4Q8K4J2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf4Q8K4J2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf4Q8K4J2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ebf4Q8K4J2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebf4Q8K4J2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ebf4Q8K4J2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ebf4Q8K4J2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms