Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Brat1Q8C3R1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Brat1Q8C3R1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Brat1Q8C3R1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.59■■□□□ 1.05
Brat1Q8C3R1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.59■■□□□ 1.05
Brat1Q8C3R1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brat1Q8C3R1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brat1Q8C3R1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Brat1Q8C3R1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Brat1Q8C3R1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Brat1Q8C3R1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Brat1Q8C3R1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Brat1Q8C3R1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brat1Q8C3R1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brat1Q8C3R1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brat1Q8C3R1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brat1Q8C3R1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brat1Q8C3R1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Brat1Q8C3R1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brat1Q8C3R1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brat1Q8C3R1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.56■■□□□ 1.04
Brat1Q8C3R1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.56■■□□□ 1.04
Brat1Q8C3R1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Brat1Q8C3R1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brat1Q8C3R1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Brat1Q8C3R1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Brat1Q8C3R1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.54■■□□□ 1.04
Brat1Q8C3R1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Brat1Q8C3R1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.54■■□□□ 1.04
Brat1Q8C3R1 Gm43530-201ENSMUST00000195920 274 ntBASIC21.54■■□□□ 1.04
Brat1Q8C3R1 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.54■■□□□ 1.04
Brat1Q8C3R1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brat1Q8C3R1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.54■■□□□ 1.04
Brat1Q8C3R1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Brat1Q8C3R1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brat1Q8C3R1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brat1Q8C3R1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brat1Q8C3R1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brat1Q8C3R1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Brat1Q8C3R1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Brat1Q8C3R1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.52■■□□□ 1.04
Brat1Q8C3R1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Brat1Q8C3R1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Brat1Q8C3R1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Brat1Q8C3R1 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.5■■□□□ 1.03
Brat1Q8C3R1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Brat1Q8C3R1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Brat1Q8C3R1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Brat1Q8C3R1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Brat1Q8C3R1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Brat1Q8C3R1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Brat1Q8C3R1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms