Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf4Q8BQZ5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpsf4Q8BQZ5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpsf4Q8BQZ5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.74■□□□□ 0.75
Cpsf4Q8BQZ5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.74■□□□□ 0.75
Cpsf4Q8BQZ5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.74■□□□□ 0.75
Cpsf4Q8BQZ5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf4Q8BQZ5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.73■□□□□ 0.75
Cpsf4Q8BQZ5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.73■□□□□ 0.75
Cpsf4Q8BQZ5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf4Q8BQZ5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf4Q8BQZ5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4Q8BQZ5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4Q8BQZ5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Gm40881-201ENSMUST00000223397 166 ntBASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4Q8BQZ5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf4Q8BQZ5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf4Q8BQZ5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf4Q8BQZ5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf4Q8BQZ5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf4Q8BQZ5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.69■□□□□ 0.74
Cpsf4Q8BQZ5 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.69■□□□□ 0.74
Cpsf4Q8BQZ5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Gm10399-202ENSMUST00000202768 748 ntBASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4Q8BQZ5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Gm7417-201ENSMUST00000192950 473 ntBASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4Q8BQZ5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf4Q8BQZ5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf4Q8BQZ5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.66■□□□□ 0.74
Cpsf4Q8BQZ5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.66■□□□□ 0.74
Cpsf4Q8BQZ5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cpsf4Q8BQZ5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf4Q8BQZ5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cpsf4Q8BQZ5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.64■□□□□ 0.74
Cpsf4Q8BQZ5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf4Q8BQZ5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf4Q8BQZ5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms