Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Csnk1a1Q8BK63 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Csnk1a1Q8BK63 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Csnk1a1Q8BK63 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Csnk1a1Q8BK63 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Csnk1a1Q8BK63 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Csnk1a1Q8BK63 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Csnk1a1Q8BK63 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Csnk1a1Q8BK63 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Csnk1a1Q8BK63 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Csnk1a1Q8BK63 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Csnk1a1Q8BK63 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Csnk1a1Q8BK63 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Csnk1a1Q8BK63 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Csnk1a1Q8BK63 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Csnk1a1Q8BK63 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Csnk1a1Q8BK63 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Csnk1a1Q8BK63 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Csnk1a1Q8BK63 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Csnk1a1Q8BK63 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Csnk1a1Q8BK63 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Csnk1a1Q8BK63 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Csnk1a1Q8BK63 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Csnk1a1Q8BK63 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Csnk1a1Q8BK63 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Csnk1a1Q8BK63 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Csnk1a1Q8BK63 Gm9959-201ENSMUST00000068277 390 ntBASIC18.12■□□□□ 0.49
Csnk1a1Q8BK63 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Csnk1a1Q8BK63 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Csnk1a1Q8BK63 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Csnk1a1Q8BK63 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Csnk1a1Q8BK63 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Csnk1a1Q8BK63 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.09■□□□□ 0.49
Csnk1a1Q8BK63 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.09■□□□□ 0.49
Csnk1a1Q8BK63 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Csnk1a1Q8BK63 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Csnk1a1Q8BK63 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Csnk1a1Q8BK63 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Csnk1a1Q8BK63 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Csnk1a1Q8BK63 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Csnk1a1Q8BK63 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Csnk1a1Q8BK63 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.08■□□□□ 0.49
Csnk1a1Q8BK63 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Csnk1a1Q8BK63 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Rps24-207ENSMUST00000224568 714 ntBASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Csnk1a1Q8BK63 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Csnk1a1Q8BK63 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Csnk1a1Q8BK63 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Csnk1a1Q8BK63 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.07■□□□□ 0.48
Csnk1a1Q8BK63 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Csnk1a1Q8BK63 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Csnk1a1Q8BK63 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Csnk1a1Q8BK63 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Csnk1a1Q8BK63 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Csnk1a1Q8BK63 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.05■□□□□ 0.48
Csnk1a1Q8BK63 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms