Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp8Q80U87 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp8Q80U87 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Usp8Q80U87 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp8Q80U87 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp8Q80U87 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp8Q80U87 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.36■□□□□ 0.85
Usp8Q80U87 Gm13238-201ENSMUST00000117655 780 ntBASIC20.36■□□□□ 0.85
Usp8Q80U87 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp8Q80U87 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp8Q80U87 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp8Q80U87 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp8Q80U87 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.36■□□□□ 0.85
Usp8Q80U87 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.36■□□□□ 0.85
Usp8Q80U87 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp8Q80U87 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.35■□□□□ 0.85
Usp8Q80U87 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.35■□□□□ 0.85
Usp8Q80U87 Gm43566-201ENSMUST00000196851 808 ntBASIC20.35■□□□□ 0.85
Usp8Q80U87 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Usp8Q80U87 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp8Q80U87 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp8Q80U87 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp8Q80U87 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp8Q80U87 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Usp8Q80U87 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp8Q80U87 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp8Q80U87 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Usp8Q80U87 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp8Q80U87 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp8Q80U87 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp8Q80U87 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp8Q80U87 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.34■□□□□ 0.85
Usp8Q80U87 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp8Q80U87 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Usp8Q80U87 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp8Q80U87 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Usp8Q80U87 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp8Q80U87 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp8Q80U87 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp8Q80U87 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Usp8Q80U87 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp8Q80U87 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp8Q80U87 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp8Q80U87 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp8Q80U87 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp8Q80U87 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.32■□□□□ 0.84
Usp8Q80U87 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp8Q80U87 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp8Q80U87 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp8Q80U87 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp8Q80U87 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp8Q80U87 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp8Q80U87 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp8Q80U87 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Usp8Q80U87 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp8Q80U87 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.31■□□□□ 0.84
Usp8Q80U87 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.31■□□□□ 0.84
Usp8Q80U87 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp8Q80U87 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp8Q80U87 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp8Q80U87 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp8Q80U87 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Usp8Q80U87 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Usp8Q80U87 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp8Q80U87 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp8Q80U87 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Usp8Q80U87 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Usp8Q80U87 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp8Q80U87 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Usp8Q80U87 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Usp8Q80U87 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp8Q80U87 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms