Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Gm10033-202ENSMUST00000211874 928 ntBASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Rpap1Q80TE0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC32.33■■■□□ 2.77
Rpap1Q80TE0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Rpap1Q80TE0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Rpap1Q80TE0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC32.32■■■□□ 2.76
Rpap1Q80TE0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC32.31■■■□□ 2.76
Rpap1Q80TE0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC32.31■■■□□ 2.76
Rpap1Q80TE0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC32.31■■■□□ 2.76
Rpap1Q80TE0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Rpap1Q80TE0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Rpap1Q80TE0 Il17rd-202ENSMUST00000223942 2186 ntBASIC32.31■■■□□ 2.76
Rpap1Q80TE0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC32.31■■■□□ 2.76
Rpap1Q80TE0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Rpap1Q80TE0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC32.3■■■□□ 2.76
Rpap1Q80TE0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC32.3■■■□□ 2.76
Rpap1Q80TE0 Gm10209-201ENSMUST00000203397 1607 ntBASIC32.29■■■□□ 2.76
Rpap1Q80TE0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Rpap1Q80TE0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Rpap1Q80TE0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rpap1Q80TE0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC32.28■■■□□ 2.76
Rpap1Q80TE0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rpap1Q80TE0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
Rpap1Q80TE0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rpap1Q80TE0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Rpap1Q80TE0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Rpap1Q80TE0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Rpap1Q80TE0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Rpap1Q80TE0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Rpap1Q80TE0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Rpap1Q80TE0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Rpap1Q80TE0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Rpap1Q80TE0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Rpap1Q80TE0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Rpap1Q80TE0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Rpap1Q80TE0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC32.24■■■□□ 2.75
Rpap1Q80TE0 Gm42418-201ENSMUST00000182010 1831 ntBASIC32.24■■■□□ 2.75
Rpap1Q80TE0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC32.24■■■□□ 2.75
Rpap1Q80TE0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
Rpap1Q80TE0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
Rpap1Q80TE0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC32.24■■■□□ 2.75
Rpap1Q80TE0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rpap1Q80TE0 Gm18671-201ENSMUST00000214826 683 ntBASIC32.23■■■□□ 2.75
Rpap1Q80TE0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC32.23■■■□□ 2.75
Rpap1Q80TE0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rpap1Q80TE0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rpap1Q80TE0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC32.22■■■□□ 2.75
Rpap1Q80TE0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rpap1Q80TE0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Rpap1Q80TE0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Rpap1Q80TE0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC32.21■■■□□ 2.75
Rpap1Q80TE0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Rpap1Q80TE0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
Rpap1Q80TE0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Rpap1Q80TE0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC32.2■■■□□ 2.75
Rpap1Q80TE0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Rpap1Q80TE0 AV356131-201ENSMUST00000206201 750 ntBASIC32.19■■■□□ 2.74
Rpap1Q80TE0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rpap1Q80TE0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC32.19■■■□□ 2.74
Rpap1Q80TE0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rpap1Q80TE0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Rpap1Q80TE0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Rpap1Q80TE0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Rpap1Q80TE0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Rpap1Q80TE0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
Rpap1Q80TE0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC32.17■■■□□ 2.74
Rpap1Q80TE0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Rpap1Q80TE0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Rpap1Q80TE0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC32.17■■■□□ 2.74
Rpap1Q80TE0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC32.17■■■□□ 2.74
Rpap1Q80TE0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rpap1Q80TE0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Rpap1Q80TE0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rpap1Q80TE0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rpap1Q80TE0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Rpap1Q80TE0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rpap1Q80TE0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rpap1Q80TE0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rpap1Q80TE0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Rpap1Q80TE0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Rpap1Q80TE0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Rpap1Q80TE0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC32.14■■■□□ 2.73
Rpap1Q80TE0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Rpap1Q80TE0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC32.13■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms