Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
Rtl1Q7M732 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC37.01■■■■□ 3.52
Rtl1Q7M732 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC37.01■■■■□ 3.52
Rtl1Q7M732 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
Rtl1Q7M732 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
Rtl1Q7M732 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC37■■■■□ 3.51
Rtl1Q7M732 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC37■■■■□ 3.51
Rtl1Q7M732 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC37■■■■□ 3.51
Rtl1Q7M732 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Rtl1Q7M732 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
Rtl1Q7M732 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
Rtl1Q7M732 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC36.99■■■■□ 3.51
Rtl1Q7M732 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC36.99■■■■□ 3.51
Rtl1Q7M732 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
Rtl1Q7M732 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC36.99■■■■□ 3.51
Rtl1Q7M732 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC36.98■■■■□ 3.51
Rtl1Q7M732 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
Rtl1Q7M732 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC36.97■■■■□ 3.51
Rtl1Q7M732 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC36.97■■■■□ 3.51
Rtl1Q7M732 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Rtl1Q7M732 Gm43017-201ENSMUST00000198296 752 ntBASIC36.96■■■■□ 3.51
Rtl1Q7M732 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Rtl1Q7M732 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC36.95■■■■□ 3.51
Rtl1Q7M732 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC36.95■■■■□ 3.51
Rtl1Q7M732 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
Rtl1Q7M732 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Rtl1Q7M732 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC36.94■■■■□ 3.5
Rtl1Q7M732 Serp2-204ENSMUST00000228055 705 ntBASIC36.94■■■■□ 3.5
Rtl1Q7M732 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Rtl1Q7M732 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Rtl1Q7M732 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC36.93■■■■□ 3.5
Rtl1Q7M732 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
Rtl1Q7M732 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC36.93■■■■□ 3.5
Rtl1Q7M732 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC36.92■■■■□ 3.5
Rtl1Q7M732 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Rtl1Q7M732 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC36.92■■■■□ 3.5
Rtl1Q7M732 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Rtl1Q7M732 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Rtl1Q7M732 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Rtl1Q7M732 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC36.91■■■■□ 3.5
Rtl1Q7M732 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
Rtl1Q7M732 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC36.91■■■■□ 3.5
Rtl1Q7M732 Gm9207-201ENSMUST00000198773 1115 ntBASIC36.91■■■■□ 3.5
Rtl1Q7M732 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Rtl1Q7M732 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
Rtl1Q7M732 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC36.9■■■■□ 3.5
Rtl1Q7M732 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
Rtl1Q7M732 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC36.89■■■■□ 3.5
Rtl1Q7M732 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Rtl1Q7M732 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Rtl1Q7M732 Gm43173-201ENSMUST00000202246 593 ntBASIC36.88■■■■□ 3.49
Rtl1Q7M732 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rtl1Q7M732 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC36.88■■■■□ 3.49
Rtl1Q7M732 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rtl1Q7M732 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rtl1Q7M732 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
Rtl1Q7M732 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC36.88■■■■□ 3.49
Rtl1Q7M732 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rtl1Q7M732 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
Rtl1Q7M732 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Rtl1Q7M732 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Rtl1Q7M732 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC36.87■■■■□ 3.49
Rtl1Q7M732 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Rtl1Q7M732 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Rtl1Q7M732 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Rtl1Q7M732 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Rtl1Q7M732 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Rtl1Q7M732 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC36.84■■■■□ 3.49
Rtl1Q7M732 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Rtl1Q7M732 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC36.83■■■■□ 3.49
Rtl1Q7M732 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Rtl1Q7M732 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Rtl1Q7M732 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC36.82■■■■□ 3.49
Rtl1Q7M732 Gm2011-201ENSMUST00000203124 1263 ntBASIC36.82■■■■□ 3.49
Rtl1Q7M732 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Rtl1Q7M732 Spcs1-204ENSMUST00000226782 949 ntBASIC36.81■■■■□ 3.48
Rtl1Q7M732 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Rtl1Q7M732 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Rtl1Q7M732 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC36.8■■■■□ 3.48
Rtl1Q7M732 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Rtl1Q7M732 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Rtl1Q7M732 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Rtl1Q7M732 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms