Protein–RNA interactions for Protein: Q6RUU0

Ptx4, Pentraxin-4, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx4Q6RUU0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ptx4Q6RUU0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ptx4Q6RUU0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ptx4Q6RUU0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ptx4Q6RUU0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
Ptx4Q6RUU0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ptx4Q6RUU0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ptx4Q6RUU0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.72■□□□□ 0.75
Ptx4Q6RUU0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
Ptx4Q6RUU0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ptx4Q6RUU0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.71■□□□□ 0.75
Ptx4Q6RUU0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptx4Q6RUU0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.69■□□□□ 0.74
Ptx4Q6RUU0 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.69■□□□□ 0.74
Ptx4Q6RUU0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.69■□□□□ 0.74
Ptx4Q6RUU0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.69■□□□□ 0.74
Ptx4Q6RUU0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptx4Q6RUU0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptx4Q6RUU0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptx4Q6RUU0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ptx4Q6RUU0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptx4Q6RUU0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptx4Q6RUU0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptx4Q6RUU0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptx4Q6RUU0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms