Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Casc4Q6P2L7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.64■□□□□ 0.89
Casc4Q6P2L7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casc4Q6P2L7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Casc4Q6P2L7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Gm22238-201ENSMUST00000175222 88 ntBASIC20.63■□□□□ 0.89
Casc4Q6P2L7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casc4Q6P2L7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
Casc4Q6P2L7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc4Q6P2L7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc4Q6P2L7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc4Q6P2L7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc4Q6P2L7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc4Q6P2L7 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.6■□□□□ 0.89
Casc4Q6P2L7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Casc4Q6P2L7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc4Q6P2L7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc4Q6P2L7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Casc4Q6P2L7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc4Q6P2L7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc4Q6P2L7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc4Q6P2L7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc4Q6P2L7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
Casc4Q6P2L7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.58■□□□□ 0.89
Casc4Q6P2L7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.58■□□□□ 0.89
Casc4Q6P2L7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
Casc4Q6P2L7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc4Q6P2L7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc4Q6P2L7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Casc4Q6P2L7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc4Q6P2L7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc4Q6P2L7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
Casc4Q6P2L7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc4Q6P2L7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc4Q6P2L7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Casc4Q6P2L7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Casc4Q6P2L7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Casc4Q6P2L7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Casc4Q6P2L7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Casc4Q6P2L7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms