Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb1Q61009 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scarb1Q61009 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.12■□□□□ 0.33
Scarb1Q61009 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.12■□□□□ 0.33
Scarb1Q61009 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb1Q61009 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scarb1Q61009 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.12■□□□□ 0.33
Scarb1Q61009 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb1Q61009 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb1Q61009 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb1Q61009 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb1Q61009 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scarb1Q61009 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb1Q61009 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb1Q61009 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scarb1Q61009 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.1■□□□□ 0.33
Scarb1Q61009 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scarb1Q61009 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.1■□□□□ 0.33
Scarb1Q61009 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb1Q61009 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.09■□□□□ 0.33
Scarb1Q61009 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scarb1Q61009 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scarb1Q61009 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scarb1Q61009 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scarb1Q61009 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scarb1Q61009 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scarb1Q61009 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scarb1Q61009 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.07■□□□□ 0.32
Scarb1Q61009 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Scarb1Q61009 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scarb1Q61009 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Scarb1Q61009 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scarb1Q61009 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Scarb1Q61009 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scarb1Q61009 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scarb1Q61009 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scarb1Q61009 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.06■□□□□ 0.32
Scarb1Q61009 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.06■□□□□ 0.32
Scarb1Q61009 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scarb1Q61009 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scarb1Q61009 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.05■□□□□ 0.32
Scarb1Q61009 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scarb1Q61009 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scarb1Q61009 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scarb1Q61009 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scarb1Q61009 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scarb1Q61009 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scarb1Q61009 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scarb1Q61009 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scarb1Q61009 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scarb1Q61009 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scarb1Q61009 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scarb1Q61009 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scarb1Q61009 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scarb1Q61009 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms