Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FAM78BQ5VT40 AC233723.2-201ENST00000623798 2106 ntBASIC17.98■□□□□ 0.47
FAM78BQ5VT40 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.98■□□□□ 0.47
FAM78BQ5VT40 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.97■□□□□ 0.47
FAM78BQ5VT40 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 ECEL1P2-201ENST00000461596 1295 ntBASIC17.96■□□□□ 0.47
FAM78BQ5VT40 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FAM78BQ5VT40 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.96■□□□□ 0.46
FAM78BQ5VT40 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FAM78BQ5VT40 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 GPX1-201ENST00000419349 1106 ntBASIC17.94■□□□□ 0.46
FAM78BQ5VT40 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.94■□□□□ 0.46
FAM78BQ5VT40 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 RP9P-202ENST00000450133 1212 ntBASIC17.93■□□□□ 0.46
FAM78BQ5VT40 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FAM78BQ5VT40 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.92■□□□□ 0.46
FAM78BQ5VT40 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 KRT18P10-201ENST00000388836 1287 ntBASIC17.91■□□□□ 0.46
FAM78BQ5VT40 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FAM78BQ5VT40 ANOS2P-203ENST00000472227 1816 ntBASIC17.91■□□□□ 0.46
FAM78BQ5VT40 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
FAM78BQ5VT40 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms