Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Shroom1Q5SX79 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.76■■□□□ 1.07
Shroom1Q5SX79 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Shroom1Q5SX79 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shroom1Q5SX79 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom1Q5SX79 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom1Q5SX79 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom1Q5SX79 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom1Q5SX79 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom1Q5SX79 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom1Q5SX79 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shroom1Q5SX79 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shroom1Q5SX79 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shroom1Q5SX79 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shroom1Q5SX79 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Shroom1Q5SX79 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom1Q5SX79 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom1Q5SX79 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom1Q5SX79 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom1Q5SX79 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.72■■□□□ 1.07
Shroom1Q5SX79 Gm6139-201ENSMUST00000079261 882 ntBASIC21.72■■□□□ 1.07
Shroom1Q5SX79 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shroom1Q5SX79 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shroom1Q5SX79 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom1Q5SX79 Gm43137-201ENSMUST00000198052 594 ntBASIC21.7■■□□□ 1.06
Shroom1Q5SX79 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom1Q5SX79 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shroom1Q5SX79 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shroom1Q5SX79 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom1Q5SX79 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shroom1Q5SX79 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shroom1Q5SX79 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Shroom1Q5SX79 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Shroom1Q5SX79 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shroom1Q5SX79 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shroom1Q5SX79 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shroom1Q5SX79 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shroom1Q5SX79 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shroom1Q5SX79 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.65■■□□□ 1.06
Shroom1Q5SX79 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom1Q5SX79 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.64■■□□□ 1.06
Shroom1Q5SX79 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Shroom1Q5SX79 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Shroom1Q5SX79 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Shroom1Q5SX79 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom1Q5SX79 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms