Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav7d-3Q5R1I1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-3Q5R1I1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Gm45444-201ENSMUST00000211394 898 ntBASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-3Q5R1I1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Cap2-205ENSMUST00000225824 1634 ntBASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-3Q5R1I1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav7d-3Q5R1I1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-3Q5R1I1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Iqck-206ENSMUST00000208658 2891 ntBASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-3Q5R1I1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms