Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3hdm4Q4VBF2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3hdm4Q4VBF2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hdm4Q4VBF2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
R3hdm4Q4VBF2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3hdm4Q4VBF2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
R3hdm4Q4VBF2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
R3hdm4Q4VBF2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3hdm4Q4VBF2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
R3hdm4Q4VBF2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
R3hdm4Q4VBF2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
R3hdm4Q4VBF2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
R3hdm4Q4VBF2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
R3hdm4Q4VBF2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Gm12922-201ENSMUST00000120626 809 ntBASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
R3hdm4Q4VBF2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Golgb1-201ENSMUST00000023534 498 ntBASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hdm4Q4VBF2 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Gm9847-201ENSMUST00000052528 599 ntBASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
R3hdm4Q4VBF2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hdm4Q4VBF2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Gm21956-201ENSMUST00000179946 522 ntBASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hdm4Q4VBF2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
R3hdm4Q4VBF2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.02■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms