Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SfswapQ3USH5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.41■■□□□ 1.5
SfswapQ3USH5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SfswapQ3USH5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
SfswapQ3USH5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SfswapQ3USH5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.4■■□□□ 1.5
SfswapQ3USH5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SfswapQ3USH5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SfswapQ3USH5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SfswapQ3USH5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SfswapQ3USH5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.39■■□□□ 1.49
SfswapQ3USH5 Gm43530-201ENSMUST00000195920 274 ntBASIC24.39■■□□□ 1.49
SfswapQ3USH5 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.39■■□□□ 1.49
SfswapQ3USH5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SfswapQ3USH5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SfswapQ3USH5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.38■■□□□ 1.49
SfswapQ3USH5 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.38■■□□□ 1.49
SfswapQ3USH5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SfswapQ3USH5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.38■■□□□ 1.49
SfswapQ3USH5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.38■■□□□ 1.49
SfswapQ3USH5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SfswapQ3USH5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SfswapQ3USH5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SfswapQ3USH5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SfswapQ3USH5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SfswapQ3USH5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SfswapQ3USH5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.36■■□□□ 1.49
SfswapQ3USH5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SfswapQ3USH5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SfswapQ3USH5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SfswapQ3USH5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SfswapQ3USH5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SfswapQ3USH5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SfswapQ3USH5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SfswapQ3USH5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
SfswapQ3USH5 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.35■■□□□ 1.49
SfswapQ3USH5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SfswapQ3USH5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.34■■□□□ 1.49
SfswapQ3USH5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SfswapQ3USH5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SfswapQ3USH5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
SfswapQ3USH5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SfswapQ3USH5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.33■■□□□ 1.49
SfswapQ3USH5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.33■■□□□ 1.49
SfswapQ3USH5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.33■■□□□ 1.49
SfswapQ3USH5 Gm43017-201ENSMUST00000198296 752 ntBASIC24.33■■□□□ 1.49
SfswapQ3USH5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SfswapQ3USH5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SfswapQ3USH5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
SfswapQ3USH5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SfswapQ3USH5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SfswapQ3USH5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SfswapQ3USH5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SfswapQ3USH5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SfswapQ3USH5 Gm8493-201ENSMUST00000196881 489 ntBASIC24.32■■□□□ 1.48
SfswapQ3USH5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SfswapQ3USH5 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.32■■□□□ 1.48
SfswapQ3USH5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SfswapQ3USH5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SfswapQ3USH5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SfswapQ3USH5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SfswapQ3USH5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SfswapQ3USH5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.31■■□□□ 1.48
SfswapQ3USH5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SfswapQ3USH5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SfswapQ3USH5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SfswapQ3USH5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SfswapQ3USH5 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.3■■□□□ 1.48
SfswapQ3USH5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.3■■□□□ 1.48
SfswapQ3USH5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SfswapQ3USH5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SfswapQ3USH5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SfswapQ3USH5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SfswapQ3USH5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SfswapQ3USH5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.28■■□□□ 1.48
SfswapQ3USH5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.28■■□□□ 1.48
SfswapQ3USH5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SfswapQ3USH5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SfswapQ3USH5 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.28■■□□□ 1.48
SfswapQ3USH5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SfswapQ3USH5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SfswapQ3USH5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SfswapQ3USH5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.27■■□□□ 1.48
SfswapQ3USH5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SfswapQ3USH5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms