Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brf2Q3UAW9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brf2Q3UAW9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Brf2Q3UAW9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brf2Q3UAW9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brf2Q3UAW9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.21■□□□□ 0.67
Brf2Q3UAW9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brf2Q3UAW9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Brf2Q3UAW9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brf2Q3UAW9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brf2Q3UAW9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brf2Q3UAW9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Brf2Q3UAW9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.2■□□□□ 0.66
Brf2Q3UAW9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brf2Q3UAW9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brf2Q3UAW9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brf2Q3UAW9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.18■□□□□ 0.66
Brf2Q3UAW9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brf2Q3UAW9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brf2Q3UAW9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.15■□□□□ 0.66
Brf2Q3UAW9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Brf2Q3UAW9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brf2Q3UAW9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Brf2Q3UAW9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brf2Q3UAW9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Brf2Q3UAW9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.14■□□□□ 0.65
Brf2Q3UAW9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Brf2Q3UAW9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brf2Q3UAW9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brf2Q3UAW9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brf2Q3UAW9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brf2Q3UAW9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.14■□□□□ 0.65
Brf2Q3UAW9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Brf2Q3UAW9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Brf2Q3UAW9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brf2Q3UAW9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brf2Q3UAW9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Brf2Q3UAW9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Brf2Q3UAW9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.13■□□□□ 0.65
Brf2Q3UAW9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms