Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.94■□□□□ 0.3
Trim63Q38HM4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim63Q38HM4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.94■□□□□ 0.3
Trim63Q38HM4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trim63Q38HM4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim63Q38HM4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.92■□□□□ 0.3
Trim63Q38HM4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim63Q38HM4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim63Q38HM4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim63Q38HM4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim63Q38HM4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim63Q38HM4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim63Q38HM4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim63Q38HM4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim63Q38HM4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim63Q38HM4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim63Q38HM4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim63Q38HM4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.89■□□□□ 0.3
Trim63Q38HM4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trim63Q38HM4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Gm22567-201ENSMUST00000175542 342 ntBASIC16.89■□□□□ 0.29
Trim63Q38HM4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim63Q38HM4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Gm30023-201ENSMUST00000197970 889 ntBASIC16.88■□□□□ 0.29
Trim63Q38HM4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.88■□□□□ 0.29
Trim63Q38HM4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim63Q38HM4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim63Q38HM4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim63Q38HM4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms