Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd3P97770 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd3P97770 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd3P97770 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd3P97770 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.65■□□□□ 0.9
Thumpd3P97770 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd3P97770 Gm14117-201ENSMUST00000122417 843 ntBASIC20.65■□□□□ 0.9
Thumpd3P97770 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Thumpd3P97770 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Thumpd3P97770 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Thumpd3P97770 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Thumpd3P97770 Gm45102-201ENSMUST00000207427 857 ntBASIC20.64■□□□□ 0.89
Thumpd3P97770 Gm10232-201ENSMUST00000089221 720 ntBASIC20.64■□□□□ 0.89
Thumpd3P97770 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.64■□□□□ 0.89
Thumpd3P97770 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Thumpd3P97770 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Thumpd3P97770 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Thumpd3P97770 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.63■□□□□ 0.89
Thumpd3P97770 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd3P97770 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Thumpd3P97770 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Thumpd3P97770 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.62■□□□□ 0.89
Thumpd3P97770 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Thumpd3P97770 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd3P97770 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Thumpd3P97770 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Thumpd3P97770 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Thumpd3P97770 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Gm9959-201ENSMUST00000068277 390 ntBASIC20.61■□□□□ 0.89
Thumpd3P97770 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd3P97770 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.6■□□□□ 0.89
Thumpd3P97770 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd3P97770 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd3P97770 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd3P97770 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd3P97770 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thumpd3P97770 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd3P97770 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd3P97770 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd3P97770 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Thumpd3P97770 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd3P97770 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.59■□□□□ 0.89
Thumpd3P97770 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd3P97770 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd3P97770 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd3P97770 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Thumpd3P97770 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.58■□□□□ 0.89
Thumpd3P97770 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd3P97770 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd3P97770 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd3P97770 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Thumpd3P97770 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Thumpd3P97770 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd3P97770 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd3P97770 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd3P97770 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd3P97770 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Thumpd3P97770 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd3P97770 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Thumpd3P97770 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Thumpd3P97770 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd3P97770 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd3P97770 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd3P97770 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd3P97770 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd3P97770 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd3P97770 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.55■□□□□ 0.88
Thumpd3P97770 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd3P97770 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd3P97770 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd3P97770 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Thumpd3P97770 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.55■□□□□ 0.88
Thumpd3P97770 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Thumpd3P97770 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd3P97770 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms