Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cacna1aP97445 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.95■□□□□ 0.62
Cacna1aP97445 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cacna1aP97445 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cacna1aP97445 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1aP97445 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cacna1aP97445 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.94■□□□□ 0.62
Cacna1aP97445 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.94■□□□□ 0.62
Cacna1aP97445 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Cacna1aP97445 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1aP97445 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Cacna1aP97445 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.93■□□□□ 0.62
Cacna1aP97445 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.93■□□□□ 0.62
Cacna1aP97445 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1aP97445 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Cacna1aP97445 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1aP97445 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cacna1aP97445 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.92■□□□□ 0.62
Cacna1aP97445 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1aP97445 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1aP97445 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1aP97445 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1aP97445 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.92■□□□□ 0.62
Cacna1aP97445 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.92■□□□□ 0.62
Cacna1aP97445 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.91■□□□□ 0.62
Cacna1aP97445 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.91■□□□□ 0.62
Cacna1aP97445 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1aP97445 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1aP97445 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1aP97445 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1aP97445 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.9■□□□□ 0.62
Cacna1aP97445 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1aP97445 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1aP97445 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1aP97445 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1aP97445 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.89■□□□□ 0.61
Cacna1aP97445 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1aP97445 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1aP97445 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1aP97445 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1aP97445 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cacna1aP97445 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1aP97445 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1aP97445 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cacna1aP97445 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1aP97445 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.88■□□□□ 0.61
Cacna1aP97445 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.88■□□□□ 0.61
Cacna1aP97445 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.88■□□□□ 0.61
Cacna1aP97445 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1aP97445 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1aP97445 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1aP97445 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1aP97445 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cacna1aP97445 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.87■□□□□ 0.61
Cacna1aP97445 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1aP97445 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cacna1aP97445 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1aP97445 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.86■□□□□ 0.61
Cacna1aP97445 AV356131-201ENSMUST00000206201 750 ntBASIC18.86■□□□□ 0.61
Cacna1aP97445 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1aP97445 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1aP97445 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1aP97445 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cacna1aP97445 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.86■□□□□ 0.61
Cacna1aP97445 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.86■□□□□ 0.61
Cacna1aP97445 Gm27801-201ENSMUST00000184174 223 ntBASIC18.86■□□□□ 0.61
Cacna1aP97445 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1aP97445 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1aP97445 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cacna1aP97445 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cacna1aP97445 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.85■□□□□ 0.61
Cacna1aP97445 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1aP97445 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1aP97445 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1aP97445 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Cacna1aP97445 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cacna1aP97445 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Cacna1aP97445 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1aP97445 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1aP97445 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1aP97445 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1aP97445 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms