Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCR9P51686 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.03■□□□□ 0.8
CCR9P51686 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCR9P51686 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCR9P51686 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCR9P51686 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCR9P51686 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCR9P51686 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCR9P51686 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCR9P51686 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.02■□□□□ 0.8
CCR9P51686 SPCS2P3-201ENST00000500401 656 ntBASIC20.02■□□□□ 0.8
CCR9P51686 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.02■□□□□ 0.8
CCR9P51686 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.02■□□□□ 0.8
CCR9P51686 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCR9P51686 DUSP8P3-201ENST00000399571 1760 ntBASIC20.02■□□□□ 0.8
CCR9P51686 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCR9P51686 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.02■□□□□ 0.79
CCR9P51686 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
CCR9P51686 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCR9P51686 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CCR9P51686 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCR9P51686 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCR9P51686 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20■□□□□ 0.79
CCR9P51686 MIR6765-201ENST00000614092 87 ntBASIC20■□□□□ 0.79
CCR9P51686 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20■□□□□ 0.79
CCR9P51686 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCR9P51686 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCR9P51686 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCR9P51686 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCR9P51686 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCR9P51686 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCR9P51686 AL022069.1-201ENST00000568025 1636 ntBASIC19.99■□□□□ 0.79
CCR9P51686 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CCR9P51686 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.99■□□□□ 0.79
CCR9P51686 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCR9P51686 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCR9P51686 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCR9P51686 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCR9P51686 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCR9P51686 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCR9P51686 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCR9P51686 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCR9P51686 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.98■□□□□ 0.79
CCR9P51686 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCR9P51686 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCR9P51686 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.98■□□□□ 0.79
CCR9P51686 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCR9P51686 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.98■□□□□ 0.79
CCR9P51686 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCR9P51686 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCR9P51686 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCR9P51686 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCR9P51686 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.97■□□□□ 0.79
CCR9P51686 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCR9P51686 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCR9P51686 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCR9P51686 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.97■□□□□ 0.79
CCR9P51686 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCR9P51686 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCR9P51686 LONRF2P2-201ENST00000439212 571 ntBASIC19.96■□□□□ 0.79
CCR9P51686 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCR9P51686 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCR9P51686 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCR9P51686 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCR9P51686 LINC00565-201ENST00000562710 2331 ntBASIC19.96■□□□□ 0.79
CCR9P51686 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCR9P51686 EP400NL-214ENST00000641289 2402 ntBASIC19.95■□□□□ 0.78
CCR9P51686 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.95■□□□□ 0.78
CCR9P51686 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.95■□□□□ 0.78
CCR9P51686 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCR9P51686 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCR9P51686 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCR9P51686 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCR9P51686 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.95■□□□□ 0.78
CCR9P51686 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.94■□□□□ 0.78
CCR9P51686 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCR9P51686 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.94■□□□□ 0.78
CCR9P51686 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCR9P51686 DUX4L9-201ENST00000449051 1259 ntBASIC19.94■□□□□ 0.78
CCR9P51686 AC011551.1-201ENST00000614101 683 ntBASIC19.94■□□□□ 0.78
CCR9P51686 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.94■□□□□ 0.78
CCR9P51686 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCR9P51686 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCR9P51686 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.94■□□□□ 0.78
CCR9P51686 AC233723.2-201ENST00000623798 2106 ntBASIC19.94■□□□□ 0.78
CCR9P51686 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CCR9P51686 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCR9P51686 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCR9P51686 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCR9P51686 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCR9P51686 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCR9P51686 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.93■□□□□ 0.78
CCR9P51686 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms