Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.2■■■□□ 2.27
COL15A1P39059 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.2■■■□□ 2.26
COL15A1P39059 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.2■■■□□ 2.26
COL15A1P39059 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
COL15A1P39059 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
COL15A1P39059 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.2■■■□□ 2.26
COL15A1P39059 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.19■■■□□ 2.26
COL15A1P39059 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 AC006455.2-201ENST00000429931 906 ntBASIC29.18■■■□□ 2.26
COL15A1P39059 AC136469.2-201ENST00000623944 1028 ntBASIC29.18■■■□□ 2.26
COL15A1P39059 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
COL15A1P39059 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL15A1P39059 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.17■■■□□ 2.26
COL15A1P39059 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.17■■■□□ 2.26
COL15A1P39059 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
COL15A1P39059 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COL15A1P39059 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL15A1P39059 AL022069.1-201ENST00000568025 1636 ntBASIC29.16■■■□□ 2.26
COL15A1P39059 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.15■■■□□ 2.26
COL15A1P39059 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
COL15A1P39059 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
COL15A1P39059 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.15■■■□□ 2.26
COL15A1P39059 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
COL15A1P39059 IRS3P-201ENST00000223076 1006 ntBASIC29.14■■■□□ 2.26
COL15A1P39059 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.14■■■□□ 2.26
COL15A1P39059 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
COL15A1P39059 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
COL15A1P39059 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
COL15A1P39059 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
COL15A1P39059 AC241377.3-202ENST00000626088 1088 ntBASIC29.13■■■□□ 2.25
COL15A1P39059 AC241585.3-202ENST00000628937 1088 ntBASIC29.13■■■□□ 2.25
COL15A1P39059 AC245100.8-202ENST00000629247 1058 ntBASIC29.13■■■□□ 2.25
COL15A1P39059 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL15A1P39059 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
COL15A1P39059 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL15A1P39059 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL15A1P39059 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.13■■■□□ 2.25
COL15A1P39059 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.13■■■□□ 2.25
COL15A1P39059 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.13■■■□□ 2.25
COL15A1P39059 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL15A1P39059 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL15A1P39059 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL15A1P39059 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.12■■■□□ 2.25
COL15A1P39059 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.12■■■□□ 2.25
COL15A1P39059 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL15A1P39059 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL15A1P39059 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL15A1P39059 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
COL15A1P39059 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL15A1P39059 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.12■■■□□ 2.25
COL15A1P39059 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
COL15A1P39059 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL15A1P39059 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.11■■■□□ 2.25
COL15A1P39059 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL15A1P39059 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.11■■■□□ 2.25
COL15A1P39059 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
COL15A1P39059 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.11■■■□□ 2.25
COL15A1P39059 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL15A1P39059 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.1■■■□□ 2.25
COL15A1P39059 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.1■■■□□ 2.25
COL15A1P39059 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.1■■■□□ 2.25
COL15A1P39059 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
COL15A1P39059 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
COL15A1P39059 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC29.09■■■□□ 2.25
COL15A1P39059 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL15A1P39059 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
COL15A1P39059 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL15A1P39059 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL15A1P39059 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL15A1P39059 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.08■■■□□ 2.25
COL15A1P39059 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.08■■■□□ 2.25
COL15A1P39059 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
COL15A1P39059 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.08■■■□□ 2.25
COL15A1P39059 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL15A1P39059 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.08■■■□□ 2.25
COL15A1P39059 AC009086.3-201ENST00000623486 1008 ntBASIC29.08■■■□□ 2.25
COL15A1P39059 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
COL15A1P39059 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.07■■■□□ 2.24
COL15A1P39059 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.07■■■□□ 2.24
COL15A1P39059 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
COL15A1P39059 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.07■■■□□ 2.24
COL15A1P39059 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
COL15A1P39059 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.06■■■□□ 2.24
COL15A1P39059 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
COL15A1P39059 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.05■■■□□ 2.24
COL15A1P39059 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL15A1P39059 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.05■■■□□ 2.24
COL15A1P39059 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
COL15A1P39059 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL15A1P39059 BX842568.3-201ENST00000418104 571 ntBASIC29.05■■■□□ 2.24
COL15A1P39059 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
COL15A1P39059 MIR3181-201ENST00000578512 73 ntBASIC29.05■■■□□ 2.24
COL15A1P39059 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.05■■■□□ 2.24
COL15A1P39059 AC233992.3-201ENST00000607491 485 ntBASIC29.05■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms