Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh4P39038 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh4P39038 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh4P39038 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh4P39038 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh4P39038 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Cdh4P39038 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh4P39038 Gm7143-201ENSMUST00000222811 859 ntBASIC19.52■□□□□ 0.72
Cdh4P39038 Gm9870-201ENSMUST00000063874 645 ntBASIC19.52■□□□□ 0.72
Cdh4P39038 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh4P39038 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cdh4P39038 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cdh4P39038 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.51■□□□□ 0.71
Cdh4P39038 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Cdh4P39038 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh4P39038 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh4P39038 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh4P39038 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh4P39038 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.51■□□□□ 0.71
Cdh4P39038 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Cdh4P39038 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh4P39038 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Cdh4P39038 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.5■□□□□ 0.71
Cdh4P39038 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh4P39038 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh4P39038 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh4P39038 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cdh4P39038 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.49■□□□□ 0.71
Cdh4P39038 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh4P39038 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh4P39038 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh4P39038 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh4P39038 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh4P39038 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh4P39038 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh4P39038 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh4P39038 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh4P39038 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh4P39038 Gm12922-201ENSMUST00000120626 809 ntBASIC19.47■□□□□ 0.71
Cdh4P39038 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.47■□□□□ 0.71
Cdh4P39038 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
Cdh4P39038 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.47■□□□□ 0.71
Cdh4P39038 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdh4P39038 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.47■□□□□ 0.71
Cdh4P39038 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh4P39038 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh4P39038 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh4P39038 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh4P39038 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Cdh4P39038 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cdh4P39038 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh4P39038 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh4P39038 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh4P39038 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh4P39038 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Cdh4P39038 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh4P39038 Gm9847-201ENSMUST00000052528 599 ntBASIC19.45■□□□□ 0.7
Cdh4P39038 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh4P39038 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cdh4P39038 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh4P39038 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh4P39038 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cdh4P39038 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Cdh4P39038 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Cdh4P39038 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdh4P39038 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdh4P39038 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.44■□□□□ 0.7
Cdh4P39038 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdh4P39038 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cdh4P39038 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdh4P39038 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Cdh4P39038 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh4P39038 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh4P39038 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdh4P39038 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.43■□□□□ 0.7
Cdh4P39038 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.43■□□□□ 0.7
Cdh4P39038 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.43■□□□□ 0.7
Cdh4P39038 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms