Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 DUX4L15-201ENST00000611059 1267 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L23-201ENST00000615195 1269 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L24-201ENST00000617576 1269 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L22-201ENST00000618238 1269 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L20-201ENST00000619712 1269 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L21-201ENST00000622058 1269 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L10-201ENST00000622460 1267 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 DUX4L25-201ENST00000624915 1269 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 AC242852.2-201ENST00000615738 1807 ntBASIC18.21■□□□□ 0.51
ATP6V0CP27449 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0CP27449 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
ATP6V0CP27449 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ATP6V0CP27449 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ATP6V0CP27449 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ATP6V0CP27449 AC126177.7-201ENST00000547904 679 ntBASIC18.2■□□□□ 0.5
ATP6V0CP27449 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP6V0CP27449 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP6V0CP27449 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP6V0CP27449 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
ATP6V0CP27449 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP6V0CP27449 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP6V0CP27449 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP6V0CP27449 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0CP27449 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 SLC25A24-204ENST00000569674 2357 ntBASIC18.18■□□□□ 0.5
ATP6V0CP27449 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP6V0CP27449 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP6V0CP27449 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP6V0CP27449 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0CP27449 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
ATP6V0CP27449 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP6V0CP27449 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ATP6V0CP27449 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP6V0CP27449 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP6V0CP27449 LINC01971-201ENST00000617888 1048 ntBASIC18.17■□□□□ 0.5
ATP6V0CP27449 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP6V0CP27449 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0CP27449 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ATP6V0CP27449 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0CP27449 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
ATP6V0CP27449 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0CP27449 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0CP27449 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0CP27449 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0CP27449 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0CP27449 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0CP27449 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP6V0CP27449 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0CP27449 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0CP27449 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ATP6V0CP27449 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0CP27449 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0CP27449 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0CP27449 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0CP27449 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP6V0CP27449 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ATP6V0CP27449 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
ATP6V0CP27449 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0CP27449 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0CP27449 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms